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Intron Name: Anas_platyrhynchos_platyrhynchos_12_162214_164325_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
162214 - 164325

Intron Length:
2112

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTGAGGAAA

5'SS Class:
major

3'SS Sequence:
TCTTCCTTTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTATTTTAAAAT

Flanking Amino Acid:
DLKPSLYPRFCAVTFL*

Intron Amino Acid Position:
681

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.1
0.38
1.1
64.3
36.9

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
77.5
0.62
1
78.2
27.9

Minor 5ss
29
-2.4
3.2
40.3
45.6

Minor BPS
58.4
0.34
1.7
77.29
39.3

Associated Gene:

Gene:
DPY19L3

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

162016 - 195127
33112