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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16241681_16242632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16241681 - 16242632

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

AATTATTGATCT

Flanking Amino Acid:

RTGHEIPAEHRDPPSKKRKM

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

74.4

0.55

0.9

36.6

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

48.8

-0

1.8

69.77

40.7

Associated Gene:

Gene:

ATMIN

Ensembl Gene ID:

ENSAPLG00000009633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010029

16235863 - 16244463

8601