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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16290551_16294602_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

16290551 - 16294602

Intron Length:

4052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGTCCATC

5'SS Class:

weak_minor

3'SS Sequence:

CGAGTGAAAGGAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CTCGAAT

U12 Branch Point Sequence:

AGTGCTCGAATT

Flanking Amino Acid:

NLLENQICPSTPALFLPNSR

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.6

-0

1.2

49.9

41.1

Major BPS

57.2

0.18

1.4

67.3

37.8

Major PPT

40.6

-0.5

1.7

33.4

39.4

Minor 5ss

58.2

0.28

2.3

74.2

Minor BPS

46.8

-0.1

1.8

64.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040316

16290515 - 16299099

8585