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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16340111_16341250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16340111 - 16341250

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTCAGCATAT

Flanking Amino Acid:

RFVVPLQYDKDAEVGSNLVT

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

81.1

0.7

0.9

77.9

35.9

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

41.6

-0.5

2.5

70.96

45.3

Associated Gene:

Gene:

BCO1

Ensembl Gene ID:

ENSAPLG00000010038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010477

16330872 - 16345156

14285