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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16342078_16344178_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16342078 - 16344178

Intron Length:

2101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATTA

5'SS Class:

weak_major

3'SS Sequence:

CACAATGATTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

CTGTCCACAATG

Flanking Amino Acid:

EVQWSPVPTKIAKLNVQTKE

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

70.4

36.4

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

59.2

0.21

1.1

54.2

44.3

Minor 5ss

61.1

0.37

2.4

73.7

42.9

Minor BPS

48.8

-0.2

1.9

56.38

45.3

Associated Gene:

Gene:

BCO1

Ensembl Gene ID:

ENSAPLG00000010038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010477

16330872 - 16345156

14285