Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_164387_165006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

164387 - 165006

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TATTTCATAAAG

Flanking Amino Acid:

RDLLDTANGHIMDGLGESEP

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.63

0.9

70.6

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

58.1

0.12

1.8

66.85

40.2

Associated Gene:

Gene:

DPY19L3

Ensembl Gene ID:

ENSAPLG00000012920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031327

162016 - 195127

33112

ENSAPLT00000024410

163632 - 195127

31496