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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16508417_16509744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16508417 - 16509744

Intron Length:

1328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGAG

5'SS Class:

major

3'SS Sequence:

TTGCTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGCTCCTTACAG

Flanking Amino Acid:

PPDLCEFFCKHCRERPRSMV

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

58.6

40.6

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

82.8

0.74

0.8

76.6

32.1

Minor 5ss

41.4

-1

3.3

55.2

Minor BPS

56.2

0.06

1.9

61.3

46.1

Associated Gene:

Gene:

CMIP

Ensembl Gene ID:

ENSAPLG00000010524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011005

16410001 - 16535506

125506