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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16514709_16521840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16514709 - 16521840

Intron Length:

7132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

GTTCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATAAAAT

Flanking Amino Acid:

LGCYVEILKMLSDYDDWRPA

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

70.8

34.7

Major BPS

84.4

0.85

34.5

Major PPT

84.1

0.77

0.8

Minor 5ss

33.5

-1.9

2.8

46.6

41.8

Minor BPS

47.6

-0.1

2.1

72.72

43.2

Associated Gene:

Gene:

CMIP

Ensembl Gene ID:

ENSAPLG00000010524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011005

16410001 - 16535506

125506