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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16521907_16523001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16521907 - 16523001

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TTTTGAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTTTGAATT

Flanking Amino Acid:

SLLQPIPFPKEALAHEKFTK

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

72.5

39.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

82.3

0.73

0.9

78.9

38.5

Minor 5ss

45.1

-0.5

2.8

54.8

43.4

Minor BPS

66.3

0.59

1.3

79.83

36.8

Associated Gene:

Gene:

CMIP

Ensembl Gene ID:

ENSAPLG00000010524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011005

16410001 - 16535506

125506