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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16531946_16533073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16531946 - 16533073

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TGATCCTAAATA

Flanking Amino Acid:

VTDAGLLALSSMKSLCSLNM

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.1

35.8

Major BPS

72.7

0.57

72.1

31.1

Major PPT

0.9

0.6

89.4

19.2

Minor 5ss

35.9

-1.6

3.3

53.4

43.8

Minor BPS

66.3

0.51

1.7

73.02

Associated Gene:

Gene:

CMIP

Ensembl Gene ID:

ENSAPLG00000010524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011005

16410001 - 16535506

125506