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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16595097_16596475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16595097 - 16596475

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAAAG

Flanking Amino Acid:

KKIMFEQQRSILDEFKKDSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.9

85.8

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

65.8

0.36

1.5

67.62

40.4

Associated Gene:

Gene:

PLCG2

Ensembl Gene ID:

ENSAPLG00000010652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011198

16594203 - 16627534

33332