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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16601754_16602589_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16601754 - 16602589

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTTCTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AATGTCTTAATT

Flanking Amino Acid:

AIKDHAFVASEYPVILSIEE

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

72.5

39.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.6

0.53

74.6

34.1

Minor 5ss

53.8

0.13

2.7

70.1

41.4

Minor BPS

0.71

1.3

78.94

37.5

Associated Gene:

Gene:

PLCG2

Ensembl Gene ID:

ENSAPLG00000010652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011198

16594203 - 16627534

33332