Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_16605471_16605674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16605471 - 16605674

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTTT

5'SS Class:

major

3'SS Sequence:

TCTCAACTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCTCTCAACT

Flanking Amino Acid:

ELYMWDTIEQKWTRHYCAIA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

74.1

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.2

0.5

0.9

62.9

38.3

Minor 5ss

48.8

-0.1

3.1

73.2

43.6

Minor BPS

66.9

0.61

1.5

81.4

40.1

Associated Gene:

Gene:

PLCG2

Ensembl Gene ID:

ENSAPLG00000010652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011198

16594203 - 16627534

33332