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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16623061_16626483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16623061 - 16626483

Intron Length:

3423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTTTCCAATATT

Flanking Amino Acid:

LIHCEMQQVLESEEELYSSC

Intron Amino Acid Position:

1012

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

32.7

Major BPS

71.8

0.54

1.2

32.5

Major PPT

77.9

0.63

79.4

32.5

Minor 5ss

30.8

-2.2

2.9

38.9

40.1

Minor BPS

50.6

0.1

2.2

80.98

40.8

Associated Gene:

Gene:

PLCG2

Ensembl Gene ID:

ENSAPLG00000010652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011198

16594203 - 16627534

33332