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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16658974_16661058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16658974 - 16661058

Intron Length:

2085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGAGCTTTATCA

Flanking Amino Acid:

GRLVNVSSMAGGIPLPRYAA

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

77.6

0.62

0.9

70.6

35.5

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

55.4

0.17

1.7

64.67

41.8

Associated Gene:

Gene:

HSD17B2

Ensembl Gene ID:

ENSAPLG00000001835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001835

16653733 - 16662600

8868