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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16661510_16662285_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

16661510 - 16662285

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTCTCCTGT

5'SS Class:

minor

3'SS Sequence:

GCTAGAAAAGGAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TACATCTGAGCT

Flanking Amino Acid:

FRTESVHVRLLVEHLPADVR

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

43.6

-0.3

1.3

38.9

41.6

Major BPS

74.9

0.62

81.3

29.9

Major PPT

41.1

-0.5

1.7

34.2

38.9

Minor 5ss

68.2

0.61

2.1

78.9

36.6

Minor BPS

49.1

0.01

1.7

66.67

43.6

Associated Gene:

Gene:

HSD17B2

Ensembl Gene ID:

ENSAPLG00000001835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001835

16653733 - 16662600

8868