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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16776839_16813559_R

Intron Information:

Intron Rank:

145095

Intron Class:

major

Intron Phase:

Intron Coordinates:

16776839 - 16813559

Intron Length:

36721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

TGCTTGAAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

0.2

1.2

65.3

38.6

Major PPT

88.1

0.86

0.7

85.4

29.3

Minor 5ss

34.9

-1.7

3.3

47.7

Minor BPS

38.7

-0.7

2.4

58.06

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019805

16776821 - 16813881

37061