Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_16833147_16833853_R

Intron Information:

Intron Rank:

145096

Intron Class:

major

Intron Phase:

Intron Coordinates:

16833147 - 16833853

Intron Length:

707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATGTC

5'SS Class:

major

3'SS Sequence:

CATGTGTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGGTTTTCCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

73.1

36.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

64.9

0.34

41.5

Minor 5ss

35.5

-1.6

3.6

52.1

45.1

Minor BPS

43.3

-0.6

1.9

47.07

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025691

16832979 - 16840910

7932