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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16873606_16874946_R

Intron Information:

Intron Rank:

139544

Intron Class:

major

Intron Phase:

Intron Coordinates:

16873606 - 16874946

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCTATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAG

U12 Branch Point Sequence:

TGTGCCTCTATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

54.6

0.12

1.5

65.3

41.5

Major PPT

74.8

0.56

0.9

69.4

35.9

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

47.4

-0.3

56.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042582

16873227 - 16882706

9480

ENSAPLT00000039201

16873227 - 16881119

7893