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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16875044_16879377_R

Intron Information:

Intron Rank:

139545

Intron Class:

major

Intron Phase:

Intron Coordinates:

16875044 - 16879377

Intron Length:

4334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTCT

5'SS Class:

major

3'SS Sequence:

TTCCACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

CAATTTTCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

33.7

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

83.4

0.75

0.8

80.5

31.1

Minor 5ss

-0.1

2.4

68.6

Minor BPS

45.9

-0.2

1.9

61.34

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042582

16873227 - 16882706

9480

ENSAPLT00000039201

16873227 - 16881119

7893