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Intron Name: Anas_platyrhynchos_platyrhynchos_12_16879447_16881061_R

Intron Information:

Intron Rank:

139546

Intron Class:

major

Intron Phase:

Intron Coordinates:

16879447 - 16881061

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

CACTTTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTCTCTCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.8

33.2

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

78.7

0.65

0.8

76.5

31.8

Minor 5ss

-0.5

2.8

54.7

43.6

Minor BPS

54.4

0.22

1.8

77.15

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039201

16873227 - 16881119

7893