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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1690051_1697751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1690051 - 1697751

Intron Length:

7701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAC

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

QQAIAVALAAGLDFIRAEGF

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

30.9

Major BPS

57.5

0.19

1.1

55.1

40.5

Major PPT

89.7

0.89

0.6

82.1

29.9

Minor 5ss

29.8

-2.3

3.3

38.4

46.6

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044381

1680488 - 1709387

28900

ENSAPLT00000025459

1680488 - 1725727

45240

ENSAPLT00000014502

1680488 - 1723854

43367

ENSAPLT00000048277

1680488 - 1722245

41758