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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1697903_1699871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1697903 - 1699871

Intron Length:

1969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TGCTGTTTACAG

Flanking Amino Acid:

QIFADIKKKHSAHALTADVG

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

78.2

0.63

0.9

71.5

38.3

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

43.8

-0.6

2.1

48.53

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014502

1680488 - 1723854

43367

ENSAPLT00000048277

1680488 - 1722245

41758

ENSAPLT00000044381

1680488 - 1709387

28900

ENSAPLT00000025459

1680488 - 1725727

45240