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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1705640_1722099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1705640 - 1722099

Intron Length:

16460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

TCTTCCTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTGCAA

U12 Branch Point Sequence:

TTGGTGTCAGCT

Flanking Amino Acid:

NYMDANALIIVNLSPSPLAC

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

75.8

39.5

Major BPS

46.8

-0.2

1.4

55.1

42.1

Major PPT

82.7

0.74

0.7

80.9

24.2

Minor 5ss

37.1

-1.5

49.5

40.8

Minor BPS

41.8

-0.5

2.4

63.19

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048277

1680488 - 1722245

41758