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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1705640_1724830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1705640 - 1724830

Intron Length:

19191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

NYMDANALIIGVQSSW*

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

75.8

39.5

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

86.4

0.82

0.7

85.4

29.4

Minor 5ss

37.1

-1.5

49.5

40.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025459

1680488 - 1725727

45240