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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1705640_1731386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1705640 - 1731386

Intron Length:

25747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

ATATCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAA

U12 Branch Point Sequence:

GTTGCATCAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

75.8

39.5

Major BPS

59.3

0.23

65.3

28.1

Major PPT

83.9

0.76

0.8

81.4

35.3

Minor 5ss

37.1

-1.5

49.5

40.8

Minor BPS

49.8

-0

1.9

64.75

40.8

Associated Gene:

Gene:

C19orf12

Ensembl Gene ID:

ENSAPLG00000019442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026913

1705544 - 1734333

28790