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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17552724_17553070_F

Intron Information:

Intron Rank:

129799

Intron Class:

major

Intron Phase:

Intron Coordinates:

17552724 - 17553070

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGATTC

5'SS Class:

major

3'SS Sequence:

TTTTGTCTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ACTTTAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

68.6

37.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

84.7

0.78

0.8

77.2

37.1

Minor 5ss

-0.7

2.9

59.5

45.2

Minor BPS

48.5

-0

2.2

70.57

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045978

17551582 - 17553192

1611