Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_17612_18319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17612 - 18319

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTATGTATA

5'SS Class:

major

3'SS Sequence:

TGTATGTATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TTGTCTGTATGT

Flanking Amino Acid:

CYKALPNRNGPLALILCPGW

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

73.4

37.3

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

68.2

0.41

62.7

43.3

Minor 5ss

46.7

-0.3

2.5

42.5

Minor BPS

-0.2

2.4

70.84

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011896

3649 - 30288

26640