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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17618548_17619594_F

Intron Information:

Intron Rank:

126312

Intron Class:

major

Intron Phase:

Intron Coordinates:

17618548 - 17619594

Intron Length:

1047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTCTGCTAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

78.6

0.64

0.9

76.9

37.3

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

-0.1

2.2

62.41

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021675

17617812 - 17619937

2126