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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17626884_17627324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17626884 - 17627324

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGCGCCCG

5'SS Class:

major

3'SS Sequence:

TCCTTTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GGCTTCTTACTT

Flanking Amino Acid:

PKSVQDLTAVVQTLLQQMQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

46.1

43.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.8

0.67

0.8

81.3

29.1

Minor 5ss

31.8

-2.1

3.2

36.2

42.8

Minor BPS

56.8

0.29

1.6

68.54

42.9

Associated Gene:

Gene:

HSBP1

Ensembl Gene ID:

ENSAPLG00000028761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041332

17624263 - 17627570

3308