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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17637444_17642512_F

Intron Information:

Intron Rank:

135116

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17637444 - 17642512

Intron Length:

5069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTCTGTTTC

5'SS Class:

weak_major

3'SS Sequence:

TGTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TTTCCCTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

59.9

40.1

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

48.5

-0.1

2.5

67.2

37.6

Minor BPS

77.1

0.93

1.6

93.68

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020788

17636277 - 17654701

18425