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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17642597_17654691_F

Intron Information:

Intron Rank:

135117

Intron Class:

major

Intron Phase:

Intron Coordinates:

17642597 - 17654691

Intron Length:

12095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGTTT

5'SS Class:

major

3'SS Sequence:

TTTTGCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CAGTCTTCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

77.5

33.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

85.1

0.79

0.8

82.2

34.1

Minor 5ss

37.3

-1.4

3.5

55.5

48.6

Minor BPS

62.4

0.47

1.6

73.13

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020788

17636277 - 17654701

18425