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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17741261_17741389_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

17741261 - 17741389

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGGGCTCT

5'SS Class:

weak_major

3'SS Sequence:

CCCTCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TTCTCCCTCCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.3

41.7

Major BPS

0.5

1.1

71.2

35.2

Major PPT

70.8

0.47

0.9

64.2

36.6

Minor 5ss

41.2

-1

3.3

56.5

42.7

Minor BPS

40.7

-0.6

3.8

76.28

46.2

Associated Gene:

Gene:

WFDC1

Ensembl Gene ID:

ENSAPLG00000013371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047735

17741214 - 17751790

10577