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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17764750_17765390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17764750 - 17765390

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GATTTCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTGCTTTGATT

Flanking Amino Acid:

HKEDLAKALNVDLHTGLSEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

1.2

85.2

32.2

Major BPS

0.85

0.9

39.9

Major PPT

0.36

59.2

42.6

Minor 5ss

-1.1

3.4

57.4

40.7

Minor BPS

72.8

0.8

1.3

86.34

34.1

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153