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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17767091_17767172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17767091 - 17767172

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TCTCTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATGTCTCTAACA

Flanking Amino Acid:

EYEDAASITVAVLIVVTVAF

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

77.8

0.63

0.8

72.5

32.2

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

65.2

0.47

1.7

74.4

37.2

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153