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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17768909_17769371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17768909 - 17769371

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

CAAATCAAAACA

Flanking Amino Acid:

EVFKMMQAEETPKTPLQKSM

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

43.8

-0.4

1.9

50.72

40.2

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153