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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17769750_17770689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17769750 - 17770689

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

ACGTGTTGAAGC

Flanking Amino Acid:

HLLSMFTIGVSLAVAAIPEG

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

0.55

1.1

63.4

44.3

Major PPT

70.1

0.45

0.9

61.1

40.1

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

-0.5

48.63

41.9

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153