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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17772675_17773412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17772675 - 17773412

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGAAAT

U12 Branch Point Sequence:

CAGTGAGAAATT

Flanking Amino Acid:

LVTSDGFQAEVSGVGYNGEG

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.1

40.7

Major BPS

46.7

-0.2

1.3

41.5

Major PPT

78.4

0.64

0.8

76.2

32.4

Minor 5ss

-0.9

3.1

56.4

Minor BPS

34.6

-1

2.4

49.22

44.7

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153