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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17777926_17778542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17777926 - 17778542

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGCAAAC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

ATGATCTTATTT

Flanking Amino Acid:

GDALETAVAIGQNIGLCNGK

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

40.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

37.9

-1.4

3.2

51.4

45.5

Minor BPS

55.8

0.26

1.6

70.41

41.1

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153