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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17778777_17779249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17778777 - 17779249

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

TCCTCCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

AGTCCCTCATCT

Flanking Amino Acid:

SPKHKLKIIKALQRAGAVVS

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

35.9

Major BPS

0.5

1.1

71.2

35.2

Major PPT

71.8

0.49

0.8

65.3

Minor 5ss

31.8

-2.1

3.1

40.4

45.3

Minor BPS

54.2

0.21

1.8

73.64

42.5

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153