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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1777918_1778382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1777918 - 1778382

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATACTAG

5'SS Class:

major

3'SS Sequence:

TTTGCATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAATT

Flanking Amino Acid:

KIITKEDKLKVVPKLNNVFS

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

60.9

40.5

Major BPS

100

1.24

0.5

100

Major PPT

84.6

0.78

0.8

81.6

Minor 5ss

48.6

-0.1

2.6

63.6

48.1

Minor BPS

82.6

1.1

1.4

97.41

26.4

Associated Gene:

Gene:

POP4

Ensembl Gene ID:

ENSAPLG00000014051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014646

1777722 - 1780385

2664

ENSAPLT00000028856

1777763 - 1780385

2623