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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17780361_17780948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17780361 - 17780948

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGAAG

5'SS Class:

major

3'SS Sequence:

CTATTTGATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGCACGTTAACT

Flanking Amino Acid:

NIIMDGPPAQSLGVEPVDRD

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

64.6

40.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

74.3

0.55

68.8

Minor 5ss

37.1

-1.5

3.2

47.3

48.3

Minor BPS

59.3

0.37

2.1

77.46

44.6

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153