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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17781403_17781734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17781403 - 17781734

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

LFNALTCRSQTKLIFEIGFF

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.7

80.4

31.6

Minor 5ss

32.8

-2

39.5

45.9

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153