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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17781877_17782565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17781877 - 17782565

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTGTGTTCACCT

Flanking Amino Acid:

IFQTENLGVLDLLFLTGLAS

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.8

0.65

0.9

76.3

32.3

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

44.6

-0.3

2.2

63.1

47.5

Associated Gene:

Gene:

ATP2C2

Ensembl Gene ID:

ENSAPLG00000012448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013018

17759526 - 17782678

23153