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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1778485_1778823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1778485 - 1778823

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTGA

5'SS Class:

major

3'SS Sequence:

CTTGTTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATG

Flanking Amino Acid:

KADLHGAIVTVTKSKCPSYV

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.5

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.8

81.3

30.7

Minor 5ss

49.4

-0

2.5

65.4

45.8

Minor BPS

72.1

0.56

1.2

71.21

36.3

Associated Gene:

Gene:

POP4

Ensembl Gene ID:

ENSAPLG00000014051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028856

1777763 - 1780385

2623

ENSAPLT00000014646

1777722 - 1780385

2664