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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1778886_1779097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1778886 - 1779097

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CCTCTTTTCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTCTCTGATCC

Flanking Amino Acid:

RDLCYGLKPDAQPQMVQAKL

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.4

65.9

42.7

Major BPS

0.72

38.9

Major PPT

71.1

0.47

70.1

34.1

Minor 5ss

40.5

-1.1

2.8

44.7

43.5

Minor BPS

57.3

0.21

1.7

72.59

38.1

Associated Gene:

Gene:

POP4

Ensembl Gene ID:

ENSAPLG00000014051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028856

1777763 - 1780385

2623

ENSAPLT00000014646

1777722 - 1780385

2664