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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17791501_17792111_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17791501 - 17792111

Intron Length:
611

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACACTGA

5'SS Class:
major

3'SS Sequence:
TTAATCTTTCAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
GATGTTTTAATC

Flanking Amino Acid:
GPVKGKQIQEFTEDLIMSVV

Intron Amino Acid Position:
134

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.6
0.46
1.1
59.4
42.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
70.6
0.46
1.1
68.3
42.2

Minor 5ss
41.5
-0.9
3.2
56.3
47.8

Minor BPS
60.2
0.3
1.3
63.26
36.7

Associated Gene:

Gene:
MEAK7

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17785185 - 17796423
11239