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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1780197_1780281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1780197 - 1780281

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

GTGCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCGCCGCTGACG

Flanking Amino Acid:

MEGALYGGLPRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

65.9

0.36

0.9

58.5

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

39.5

-0.9

2.3

40.29

Associated Gene:

Gene:

POP4

Ensembl Gene ID:

ENSAPLG00000014051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014646

1777722 - 1780385

2664

ENSAPLT00000028856

1777763 - 1780385

2623