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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17850588_17860239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17850588 - 17860239

Intron Length:

9652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCATT

5'SS Class:

major

3'SS Sequence:

TTATCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

DKTLVKEVVQNFAKEFVISD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.1

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.3

0.82

0.8

81.3

30.4

Minor 5ss

53.1

0.11

2.6

75.1

40.8

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

COTL1

Ensembl Gene ID:

ENSAPLG00000016644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042948

17850194 - 17860397

10204