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Intron Name: Anas_platyrhynchos_platyrhynchos_12_17981798_17983790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17981798 - 17983790

Intron Length:

1993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGATAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TTGATTGCATTT

Flanking Amino Acid:

GSLKNGVQSERLINPSDGNA

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

73.8

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

32.8

-2

3.4

46.1

49.1

Minor BPS

38.3

-0.8

2.1

55.55

41.7

Associated Gene:

Gene:

CRISPLD2

Ensembl Gene ID:

ENSAPLG00000011940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020988

17962013 - 17984753

22741